WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22D6.3a.1 Sequence Name  F22D6.3a.1
Length (nt)  1803   Chromosome Location  I: 7088030-7090062
Chromosome . Primary Identifier  I Chromosome Location . Start  7088030
Chromosome Location . End  7090062 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22D6.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003815 nars-1 F22D6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22D6.3a F22D6.3a 1638   I: 7088190-7088537

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22D6.3a.1 7088030 7090062 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17972   508   I: 7088030-7088537 Caenorhabditis elegans
Exon17974   162   I: 7088583-7088744 Caenorhabditis elegans
Exon17975   175   I: 7088790-7088964 Caenorhabditis elegans
Exon17976   473   I: 7089017-7089489 Caenorhabditis elegans
Exon17977   396   I: 7089536-7089931 Caenorhabditis elegans
Exon17980   89   I: 7089974-7090062 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22D6.3a.1 7088030 7090062 -1

1 Sequence

Length
1803

1 Sequence Ontology Term

Identifier Name Description
transcript