WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22D6.6.1 Sequence Name  F22D6.6.1
Length (nt)  2143   Chromosome Location  I: 7095486-7098400
Chromosome . Primary Identifier  I Chromosome Location . Start  7095486
Chromosome Location . End  7098400 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22D6.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009052 ekl-1 F22D6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22D6.6 F22D6.6 1821   I: 7095488-7095619

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22D6.6.1 7095486 7098400 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18018   134   I: 7095486-7095619 Caenorhabditis elegans
Exon18019   122   I: 7095677-7095798 Caenorhabditis elegans
Exon18020   265   I: 7095840-7096104 Caenorhabditis elegans
Exon18021   491   I: 7096179-7096669 Caenorhabditis elegans
Exon18022   105   I: 7096719-7096823 Caenorhabditis elegans
Exon18023   177   I: 7096874-7097050 Caenorhabditis elegans
Exon18024   189   I: 7097096-7097284 Caenorhabditis elegans
Exon18025   65   I: 7097571-7097635 Caenorhabditis elegans
Exon18026   87   I: 7097683-7097769 Caenorhabditis elegans
Exon18027   86   I: 7097816-7097901 Caenorhabditis elegans
Exon18028   422   I: 7097979-7098400 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22D6.6.1 7095486 7098400 1

1 Sequence

Length
2143

1 Sequence Ontology Term

Identifier Name Description
transcript