WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10D3.3.1 Sequence Name  K10D3.3.1
Length (nt)  1043   Chromosome Location  I: 7132747-7134370
Chromosome . Primary Identifier  I Chromosome Location . Start  7132747
Chromosome Location . End  7134370 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10D3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006394 taf-11.2 K10D3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10D3.3 K10D3.3 846   I: 7132748-7132857

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10D3.3.1 7132747 7134370 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18108   111   I: 7132747-7132857 Caenorhabditis elegans
Exon18109   259   I: 7133186-7133444 Caenorhabditis elegans
Exon18110   215   I: 7133627-7133841 Caenorhabditis elegans
Exon18111   458   I: 7133913-7134370 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10D3.3.1 7132747 7134370 1

1 Sequence

Length
1043

1 Sequence Ontology Term

Identifier Name Description
transcript