WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H37N21.1.1 Sequence Name  H37N21.1.1
Length (nt)  3903   Chromosome Location  I: 7138482-7147578
Chromosome . Primary Identifier  I Chromosome Location . Start  7138482
Chromosome Location . End  7147578 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H37N21.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010427 hpo-11 H37N21.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H37N21.1 H37N21.1 1950   I: 7140278-7140401

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H37N21.1.1 7138482 7147578 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18119   1920   I: 7138482-7140401 Caenorhabditis elegans
Exon18122   104   I: 7140453-7140556 Caenorhabditis elegans
Exon18123   124   I: 7140910-7141033 Caenorhabditis elegans
Exon18124   398   I: 7141608-7142005 Caenorhabditis elegans
Exon18125   165   I: 7142060-7142224 Caenorhabditis elegans
Exon18126   99   I: 7142438-7142536 Caenorhabditis elegans
Exon18127   260   I: 7142982-7143241 Caenorhabditis elegans
Exon18128   84   I: 7143286-7143369 Caenorhabditis elegans
Exon18130   136   I: 7145452-7145587 Caenorhabditis elegans
Exon18131   90   I: 7145645-7145734 Caenorhabditis elegans
Exon18132   164   I: 7146201-7146364 Caenorhabditis elegans
Exon18133   109   I: 7146529-7146637 Caenorhabditis elegans
Exon18134   153   I: 7147138-7147290 Caenorhabditis elegans
Exon18135   97   I: 7147482-7147578 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H37N21.1.1 7138482 7147578 -1

1 Sequence

Length
3903

1 Sequence Ontology Term

Identifier Name Description
transcript