WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07G5.1.1 Sequence Name  K07G5.1.1
Length (nt)  3686   Chromosome Location  I: 7152462-7156786
Chromosome . Primary Identifier  I Chromosome Location . Start  7152462
Chromosome Location . End  7156786 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07G5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010641 crml-1 K07G5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07G5.1 K07G5.1 3171   I: 7152911-7153079

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07G5.1.1 7152462 7156786 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18150   618   I: 7152462-7153079 Caenorhabditis elegans
Exon18151   1349   I: 7153164-7154512 Caenorhabditis elegans
Exon18153   573   I: 7154561-7155133 Caenorhabditis elegans
Exon18154   76   I: 7155229-7155304 Caenorhabditis elegans
Exon18155   115   I: 7155356-7155470 Caenorhabditis elegans
Exon18156   98   I: 7155514-7155611 Caenorhabditis elegans
Exon18157   400   I: 7155705-7156104 Caenorhabditis elegans
Exon18158   224   I: 7156223-7156446 Caenorhabditis elegans
Exon18159   118   I: 7156495-7156612 Caenorhabditis elegans
Exon18160   115   I: 7156672-7156786 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07G5.1.1 7152462 7156786 -1

1 Sequence

Length
3686

1 Sequence Ontology Term

Identifier Name Description
transcript