WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07G5.2.1 Sequence Name  K07G5.2.1
Length (nt)  902   Chromosome Location  I: 7159714-7160917
Chromosome . Primary Identifier  I Chromosome Location . Start  7159714
Chromosome Location . End  7160917 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07G5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006963 xpa-1 K07G5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07G5.2 K07G5.2 726   I: 7159725-7159795

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07G5.2.1 7159714 7160917 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18161   82   I: 7159714-7159795 Caenorhabditis elegans
Exon18162   98   I: 7159839-7159936 Caenorhabditis elegans
Exon18163   182   I: 7160108-7160289 Caenorhabditis elegans
Exon18164   102   I: 7160335-7160436 Caenorhabditis elegans
Exon18165   438   I: 7160480-7160917 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07G5.2.1 7159714 7160917 1

1 Sequence

Length
902

1 Sequence Ontology Term

Identifier Name Description
transcript