WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07G5.3.1 Sequence Name  K07G5.3.1
Length (nt)  3757   Chromosome Location  I: 7160936-7166523
Chromosome . Primary Identifier  I Chromosome Location . Start  7160936
Chromosome Location . End  7166523 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07G5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010642 mks-6 K07G5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07G5.3 K07G5.3 3609   I: 7161016-7161052

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07G5.3.1 7160936 7166523 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18166   117   I: 7160936-7161052 Caenorhabditis elegans
Exon18167   275   I: 7161102-7161376 Caenorhabditis elegans
Exon18168   276   I: 7161808-7162083 Caenorhabditis elegans
Exon18169   191   I: 7162127-7162317 Caenorhabditis elegans
Exon18170   67   I: 7162368-7162434 Caenorhabditis elegans
Exon18171   74   I: 7162696-7162769 Caenorhabditis elegans
Exon18172   162   I: 7162818-7162979 Caenorhabditis elegans
Exon18173   147   I: 7163047-7163193 Caenorhabditis elegans
Exon18174   375   I: 7163241-7163615 Caenorhabditis elegans
Exon18175   204   I: 7163660-7163863 Caenorhabditis elegans
Exon18176   254   I: 7163913-7164166 Caenorhabditis elegans
Exon18177   239   I: 7164416-7164654 Caenorhabditis elegans
Exon18178   167   I: 7164699-7164865 Caenorhabditis elegans
Exon18179   461   I: 7164932-7165392 Caenorhabditis elegans
Exon18180   206   I: 7165728-7165933 Caenorhabditis elegans
Exon18181   542   I: 7165982-7166523 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07G5.3.1 7160936 7166523 1

1 Sequence

Length
3757

1 Sequence Ontology Term

Identifier Name Description
transcript