WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M05B5.6 Sequence Name  M05B5.6
Length (nt)  1446   Chromosome Location  I: 7183062-7183210
Chromosome . Primary Identifier  I Chromosome Location . Start  7183062
Chromosome Location . End  7183210
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M05B5.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18081 TRPA-2 55.5 481 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00000591
WBRNAi00050930
WBRNAi00004042
WBRNAi00117947

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M05B5.6 7183062 7183210 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010873 trpa-2 M05B5.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:M05B5.6 7183062 7183210 1
CDS:M05B5.6 7183285 7183430 1
CDS:M05B5.6 7183479 7183582 1
CDS:M05B5.6 7183625 7183780 1
CDS:M05B5.6 7183830 7183961 1
CDS:M05B5.6 7184437 7184955 1
CDS:M05B5.6 7185028 7185192 1
CDS:M05B5.6 7185391 7185465 1

1 Sequence

Length
1446

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M05B5.6.1 M05B5.6.1 1640   I: 7183053-7185650