WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M05B5.3b.1 Sequence Name  M05B5.3b.1
Length (nt)  1595   Chromosome Location  I: 7185695-7188297
Chromosome . Primary Identifier  I Chromosome Location . Start  7185695
Chromosome Location . End  7188297 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M05B5.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010871 M05B5.3 M05B5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M05B5.3b M05B5.3b 1404   I: 7185748-7185757

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M05B5.3b.1 7185695 7188297 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18215   63   I: 7185695-7185757 Caenorhabditis elegans
Exon18216   216   I: 7186445-7186660 Caenorhabditis elegans
Exon18219   297   I: 7186709-7187005 Caenorhabditis elegans
Exon18221   633   I: 7187050-7187682 Caenorhabditis elegans
Exon18223   163   I: 7187751-7187913 Caenorhabditis elegans
Exon18226   223   I: 7188075-7188297 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M05B5.3b.1 7185695 7188297 1

1 Sequence

Length
1595

1 Sequence Ontology Term

Identifier Name Description
transcript