WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M05B5.5a Sequence Name  M05B5.5a
Length (nt)  1200   Chromosome Location  I: 7191240-7191362
Chromosome . Primary Identifier  I Chromosome Location . Start  7191240
Chromosome Location . End  7191362
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M05B5.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06191 HLH-2, isoform a 43.2 399 Caenorhabditis elegans
 

Other

80 RNAi

WormBase ID
WBRNAi00063337
WBRNAi00062664
WBRNAi00050929
WBRNAi00009007
WBRNAi00077261
WBRNAi00073229
WBRNAi00065937
WBRNAi00084170
WBRNAi00084171
WBRNAi00084184
WBRNAi00084183
WBRNAi00084186
WBRNAi00084185
WBRNAi00073228
WBRNAi00073230
WBRNAi00065938
WBRNAi00081397
WBRNAi00027755
WBRNAi00063338
WBRNAi00063339
WBRNAi00063340
WBRNAi00116722
WBRNAi00115656
WBRNAi00116305
WBRNAi00084162
WBRNAi00084164
WBRNAi00084163
WBRNAi00065787
WBRNAi00084182
WBRNAi00038571

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M05B5.5a 7191240 7191362 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001949 hlh-2 M05B5.5 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:M05B5.5a 7191240 7191362 -1
CDS:M05B5.5a 7191530 7191671 -1
CDS:M05B5.5a 7191784 7192085 -1
CDS:M05B5.5a 7192925 7193412 -1
CDS:M05B5.5a 7193763 7193907 -1

1 Sequence

Length
1200

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M05B5.5a.1 M05B5.5a.1 1665   I: 7190788-7193920