WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01H6.2.1 Sequence Name  C01H6.2.1
Length (nt)  2187   Chromosome Location  I: 7204541-7207717
Chromosome . Primary Identifier  I Chromosome Location . Start  7204541
Chromosome Location . End  7207717 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01H6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007252 mlt-2 C01H6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01H6.2 C01H6.2 2007   I: 7204591-7204701

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01H6.2.1 7204541 7207717 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18249   161   I: 7204541-7204701 Caenorhabditis elegans
Exon18250   80   I: 7204751-7204830 Caenorhabditis elegans
Exon18251   418   I: 7204890-7205307 Caenorhabditis elegans
Exon18252   105   I: 7205386-7205490 Caenorhabditis elegans
Exon18253   123   I: 7205538-7205660 Caenorhabditis elegans
Exon18254   113   I: 7205711-7205823 Caenorhabditis elegans
Exon18255   190   I: 7206048-7206237 Caenorhabditis elegans
Exon18256   131   I: 7206314-7206444 Caenorhabditis elegans
Exon18257   227   I: 7206513-7206739 Caenorhabditis elegans
Exon18258   317   I: 7206960-7207276 Caenorhabditis elegans
Exon18259   102   I: 7207346-7207447 Caenorhabditis elegans
Exon18260   220   I: 7207498-7207717 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01H6.2.1 7204541 7207717 -1

1 Sequence

Length
2187

1 Sequence Ontology Term

Identifier Name Description
transcript