WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01H6.6.1 Sequence Name  C01H6.6.1
Length (nt)  1832   Chromosome Location  I: 7222291-7224481
Chromosome . Primary Identifier  I Chromosome Location . Start  7222291
Chromosome Location . End  7224481 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01H6.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007255 cnnm-4 C01H6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01H6.6 C01H6.6 1404   I: 7222373-7222404

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01H6.6.1 7222291 7224481 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18329   114   I: 7222291-7222404 Caenorhabditis elegans
Exon18330   287   I: 7222453-7222739 Caenorhabditis elegans
Exon18331   113   I: 7222783-7222895 Caenorhabditis elegans
Exon18332   251   I: 7222942-7223192 Caenorhabditis elegans
Exon18333   119   I: 7223239-7223357 Caenorhabditis elegans
Exon18334   89   I: 7223402-7223490 Caenorhabditis elegans
Exon18335   183   I: 7223534-7223716 Caenorhabditis elegans
Exon18336   117   I: 7223761-7223877 Caenorhabditis elegans
Exon18337   559   I: 7223923-7224481 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01H6.6.1 7222291 7224481 1

1 Sequence

Length
1832

1 Sequence Ontology Term

Identifier Name Description
transcript