WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01H6.9.1 Sequence Name  C01H6.9.1
Length (nt)  2999   Chromosome Location  I: 7229429-7233121
Chromosome . Primary Identifier  I Chromosome Location . Start  7229429
Chromosome Location . End  7233121 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01H6.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007258 hasp-1 C01H6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01H6.9 C01H6.9 2850   I: 7229577-7229699

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01H6.9.1 7229429 7233121 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18370   271   I: 7229429-7229699 Caenorhabditis elegans
Exon18371   118   I: 7229744-7229861 Caenorhabditis elegans
Exon18372   103   I: 7229909-7230011 Caenorhabditis elegans
Exon18373   1440   I: 7230066-7231505 Caenorhabditis elegans
Exon18374   138   I: 7231661-7231798 Caenorhabditis elegans
Exon18375   144   I: 7231905-7232048 Caenorhabditis elegans
Exon18376   117   I: 7232098-7232214 Caenorhabditis elegans
Exon18377   165   I: 7232263-7232427 Caenorhabditis elegans
Exon18378   169   I: 7232472-7232640 Caenorhabditis elegans
Exon18379   145   I: 7232740-7232884 Caenorhabditis elegans
Exon18380   189   I: 7232933-7233121 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01H6.9.1 7229429 7233121 -1

1 Sequence

Length
2999

1 Sequence Ontology Term

Identifier Name Description
transcript