WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R06C7.1.1 Sequence Name  R06C7.1.1
Length (nt)  3055   Chromosome Location  I: 7235384-7238792
Chromosome . Primary Identifier  I Chromosome Location . Start  7235384
Chromosome Location . End  7238792 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06C7.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011061 wago-1 R06C7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06C7.1 R06C7.1 2838   I: 7235408-7235572

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R06C7.1.1 7235384 7238792 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18386   189   I: 7235384-7235572 Caenorhabditis elegans
Exon18387   581   I: 7235619-7236199 Caenorhabditis elegans
Exon18388   733   I: 7236244-7236976 Caenorhabditis elegans
Exon18389   176   I: 7237025-7237200 Caenorhabditis elegans
Exon18390   176   I: 7237244-7237419 Caenorhabditis elegans
Exon18391   347   I: 7237462-7237808 Caenorhabditis elegans
Exon18392   240   I: 7237855-7238094 Caenorhabditis elegans
Exon18393   308   I: 7238135-7238442 Caenorhabditis elegans
Exon18394   305   I: 7238488-7238792 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R06C7.1.1 7235384 7238792 1

1 Sequence

Length
3055

1 Sequence Ontology Term

Identifier Name Description
transcript