WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R06C7.3.1 Sequence Name  R06C7.3.1
Length (nt)  1570   Chromosome Location  I: 7238994-7243763
Chromosome . Primary Identifier  I Chromosome Location . Start  7238994
Chromosome Location . End  7243763 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06C7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000963 dhp-1 R06C7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06C7.3 R06C7.3 1470   I: 7239084-7239234

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R06C7.3.1 7238994 7243763 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18396   241   I: 7238994-7239234 Caenorhabditis elegans
Exon18397   65   I: 7240244-7240308 Caenorhabditis elegans
Exon18399   247   I: 7240439-7240685 Caenorhabditis elegans
Exon18401   66   I: 7240737-7240802 Caenorhabditis elegans
Exon18403   278   I: 7241250-7241527 Caenorhabditis elegans
Exon18405   212   I: 7241895-7242106 Caenorhabditis elegans
Exon18407   178   I: 7242185-7242362 Caenorhabditis elegans
Exon18409   181   I: 7242948-7243128 Caenorhabditis elegans
Exon18411   102   I: 7243662-7243763 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R06C7.3.1 7238994 7243763 -1

1 Sequence

Length
1570

1 Sequence Ontology Term

Identifier Name Description
transcript