WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R06C7.7a.1 Sequence Name  R06C7.7a.1
Length (nt)  1625   Chromosome Location  I: 7248827-7250816
Chromosome . Primary Identifier  I Chromosome Location . Start  7248827
Chromosome Location . End  7250816 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06C7.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003041 lin-61 R06C7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06C7.7a R06C7.7a 1476   I: 7248976-7249054

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R06C7.7a.1 7248827 7250816 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18432   228   I: 7248827-7249054 Caenorhabditis elegans
Exon18434   140   I: 7249109-7249248 Caenorhabditis elegans
Exon18436   810   I: 7249336-7250145 Caenorhabditis elegans
Exon18438   97   I: 7250196-7250292 Caenorhabditis elegans
Exon18440   167   I: 7250419-7250585 Caenorhabditis elegans
Exon18442   183   I: 7250634-7250816 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R06C7.7a.1 7248827 7250816 -1

1 Sequence

Length
1625

1 Sequence Ontology Term

Identifier Name Description
transcript