WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R06C7.10.1 Sequence Name  R06C7.10.1
Length (nt)  6457   Chromosome Location  I: 7258946-7267057
Chromosome . Primary Identifier  I Chromosome Location . Start  7258946
Chromosome Location . End  7267057 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06C7.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002348 myo-1 R06C7.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06C7.10 R06C7.10 5817   I: 7259464-7259604

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R06C7.10.1 7258946 7267057 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18471   659   I: 7258946-7259604 Caenorhabditis elegans
Exon18473   236   I: 7260055-7260290 Caenorhabditis elegans
Exon18474   205   I: 7260340-7260544 Caenorhabditis elegans
Exon18475   4277   I: 7260593-7264869 Caenorhabditis elegans
Exon18476   168   I: 7264917-7265084 Caenorhabditis elegans
Exon18477   105   I: 7265137-7265241 Caenorhabditis elegans
Exon18478   343   I: 7265294-7265636 Caenorhabditis elegans
Exon18479   273   I: 7266014-7266286 Caenorhabditis elegans
Exon18480   191   I: 7266867-7267057 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R06C7.10.1 7258946 7267057 -1

1 Sequence

Length
6457

1 Sequence Ontology Term

Identifier Name Description
transcript