WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21C3.2.1 Sequence Name  F21C3.2.1
Length (nt)  2138   Chromosome Location  I: 7274282-7278573
Chromosome . Primary Identifier  I Chromosome Location . Start  7274282
Chromosome Location . End  7278573 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21C3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009001 tyr-3 F21C3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21C3.2 F21C3.2 2082   I: 7274291-7274363

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21C3.2.1 7274282 7278573 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18497   82   I: 7274282-7274363 Caenorhabditis elegans
Exon18498   112   I: 7275070-7275181 Caenorhabditis elegans
Exon18499   73   I: 7275232-7275304 Caenorhabditis elegans
Exon18500   116   I: 7275396-7275511 Caenorhabditis elegans
Exon18501   165   I: 7275564-7275728 Caenorhabditis elegans
Exon18502   380   I: 7276076-7276455 Caenorhabditis elegans
Exon18503   194   I: 7276522-7276715 Caenorhabditis elegans
Exon18504   171   I: 7276760-7276930 Caenorhabditis elegans
Exon18505   123   I: 7277355-7277477 Caenorhabditis elegans
Exon18506   76   I: 7277518-7277593 Caenorhabditis elegans
Exon18507   77   I: 7277636-7277712 Caenorhabditis elegans
Exon18508   254   I: 7277759-7278012 Caenorhabditis elegans
Exon18509   133   I: 7278177-7278309 Caenorhabditis elegans
Exon18510   182   I: 7278392-7278573 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21C3.2.1 7274282 7278573 -1

1 Sequence

Length
2138

1 Sequence Ontology Term

Identifier Name Description
transcript