WormMine: Gene WBGene00014343

• WormBase Gene ID: WBGene00014343
• Gene Name: F21C3.t1
• Sequence Name: F21C3.t1
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by emr-1; lem-2; and daf-2 based on RNA-seq and microarray studies.
• Biotype: SO:0001272
• Genetic Position: :±
• Length (nt): 73

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00014343

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:F21C3.t1	F21C3.t1	73	I: 7279355-7279427

Other

0 CDSs

0 RNAi Result

4 Allele

• gk962858
• gk962706
• gk963902
• gk881223

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: WBGene00014343
• Start: 7279355
• End: 7279427
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

4 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in daf-2(e1370) comparing to in N2.	Student's t-test, fold change > 2, p-value < 0.05.	WBPaper00055386:daf-2(e1370)_upregulated
	Genes that showed increased mRNA expression in emr-1(RNAi);lem-2(tm1582) comparing to N2.	Library siggenes in R was applied to select the differentially expressed loci using the false discovery rate-based SAM method. Genes presenting a delta value > 4 were considered to be significantly altered.	WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
	Genes that showed increased mRNA expression in emr-1(gk119) comparing to N2.	Library siggenes in R was applied to select the differentially expressed loci using the false discovery rate-based SAM method. Genes presenting a delta value > 4 were considered to be significantly altered.	WBPaper00044786:emr-1(gk119)_upregulated
	Small RNAs (less than 200 bases long) that showed significantly increased expression in rpc-1(RNAi) animals.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00067416:rpc-1(RNAi)_upregulated_smallRNA

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00014343
• Start: 7279355
• End: 7279427
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 73

1 Sequence Ontology Term