WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21C3.5.1 Sequence Name  F21C3.5.1
Length (nt)  569   Chromosome Location  I: 7282964-7283762
Chromosome . Primary Identifier  I Chromosome Location . Start  7282964
Chromosome Location . End  7283762 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21C3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009004 pfd-6 F21C3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21C3.5 F21C3.5 381   I: 7283130-7283256

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21C3.5.1 7282964 7283762 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18541   293   I: 7282964-7283256 Caenorhabditis elegans
Exon18542   125   I: 7283395-7283519 Caenorhabditis elegans
Exon18543   71   I: 7283565-7283635 Caenorhabditis elegans
Exon18544   80   I: 7283683-7283762 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21C3.5.1 7282964 7283762 -1

1 Sequence

Length
569

1 Sequence Ontology Term

Identifier Name Description
transcript