WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13G3.2.1 Sequence Name  F13G3.2.1
Length (nt)  1118   Chromosome Location  I: 7294038-7295794
Chromosome . Primary Identifier  I Chromosome Location . Start  7294038
Chromosome Location . End  7295794 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13G3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005131 srd-53 F13G3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13G3.2 F13G3.2 1011   I: 7294038-7294252

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13G3.2.1 7294038 7295794 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18556   215   I: 7294038-7294252 Caenorhabditis elegans
Exon18557   97   I: 7294309-7294405 Caenorhabditis elegans
Exon18558   138   I: 7294511-7294648 Caenorhabditis elegans
Exon18559   273   I: 7294694-7294966 Caenorhabditis elegans
Exon18560   100   I: 7295349-7295448 Caenorhabditis elegans
Exon18561   295   I: 7295500-7295794 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13G3.2.1 7294038 7295794 1

1 Sequence

Length
1118

1 Sequence Ontology Term

Identifier Name Description
transcript