WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13G3.5b.1 Sequence Name  F13G3.5b.1
Length (nt)  1013   Chromosome Location  I: 7301007-7302975
Chromosome . Primary Identifier  I Chromosome Location . Start  7301007
Chromosome Location . End  7302975 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13G3.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008765 ttx-7 F13G3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13G3.5b F13G3.5b 849   I: 7301165-7301426

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13G3.5b.1 7301007 7302975 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18588   420   I: 7301007-7301426 Caenorhabditis elegans
Exon18589   112   I: 7301663-7301774 Caenorhabditis elegans
Exon18594   155   I: 7302072-7302226 Caenorhabditis elegans
Exon18597   105   I: 7302335-7302439 Caenorhabditis elegans
Exon18600   137   I: 7302553-7302689 Caenorhabditis elegans
Exon18603   84   I: 7302892-7302975 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13G3.5b.1 7301007 7302975 -1

1 Sequence

Length
1013

1 Sequence Ontology Term

Identifier Name Description
transcript