WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52A8.4a.1 Sequence Name  F52A8.4a.1
Length (nt)  1090   Chromosome Location  I: 7342831-7345986
Chromosome . Primary Identifier  I Chromosome Location . Start  7342831
Chromosome Location . End  7345986 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52A8.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009917 glb-18 F52A8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52A8.4a F52A8.4a 717   I: 7342902-7342960

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52A8.4a.1 7342831 7345986 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18684   130   I: 7342831-7342960 Caenorhabditis elegans
Exon18685   115   I: 7343919-7344033 Caenorhabditis elegans
Exon18687   51   I: 7344076-7344126 Caenorhabditis elegans
Exon18689   186   I: 7344546-7344731 Caenorhabditis elegans
Exon18691   129   I: 7344965-7345093 Caenorhabditis elegans
Exon18694   479   I: 7345508-7345986 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52A8.4a.1 7342831 7345986 1

1 Sequence

Length
1090

1 Sequence Ontology Term

Identifier Name Description
transcript