WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07A5.4.1 Sequence Name  F07A5.4.1
Length (nt)  1223   Chromosome Location  I: 7357068-7359100
Chromosome . Primary Identifier  I Chromosome Location . Start  7357068
Chromosome Location . End  7359100 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07A5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008543 F07A5.4 F07A5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07A5.4 F07A5.4 1017   I: 7357240-7357503

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07A5.4.1 7357068 7359100 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18768   436   I: 7357068-7357503 Caenorhabditis elegans
Exon18769   129   I: 7357763-7357891 Caenorhabditis elegans
Exon18770   113   I: 7357938-7358050 Caenorhabditis elegans
Exon18771   201   I: 7358254-7358454 Caenorhabditis elegans
Exon18772   115   I: 7358514-7358628 Caenorhabditis elegans
Exon18773   93   I: 7358823-7358915 Caenorhabditis elegans
Exon18774   136   I: 7358965-7359100 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07A5.4.1 7357068 7359100 -1

1 Sequence

Length
1223

1 Sequence Ontology Term

Identifier Name Description
transcript