WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07A5.5.1 Sequence Name  F07A5.5.1
Length (nt)  2120   Chromosome Location  I: 7360226-7371534
Chromosome . Primary Identifier  I Chromosome Location . Start  7360226
Chromosome Location . End  7371534 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07A5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006306 sue-1 F07A5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07A5.5 F07A5.5 1614   I: 7360657-7360746

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07A5.5.1 7360226 7371534 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18775   521   I: 7360226-7360746 Caenorhabditis elegans
Exon18776   115   I: 7360986-7361100 Caenorhabditis elegans
Exon18777   106   I: 7361151-7361256 Caenorhabditis elegans
Exon18778   69   I: 7361565-7361633 Caenorhabditis elegans
Exon18779   112   I: 7363084-7363195 Caenorhabditis elegans
Exon18780   92   I: 7363410-7363501 Caenorhabditis elegans
Exon18781   106   I: 7363555-7363660 Caenorhabditis elegans
Exon18782   128   I: 7364285-7364412 Caenorhabditis elegans
Exon18783   121   I: 7367481-7367601 Caenorhabditis elegans
Exon18784   120   I: 7367650-7367769 Caenorhabditis elegans
Exon18785   630   I: 7370905-7371534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07A5.5.1 7360226 7371534 -1

1 Sequence

Length
2120

1 Sequence Ontology Term

Identifier Name Description
transcript