WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C15A11.3.1 Sequence Name  C15A11.3.1
Length (nt)  1872   Chromosome Location  I: 7389054-7395918
Chromosome . Primary Identifier  I Chromosome Location . Start  7389054
Chromosome Location . End  7395918 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15A11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004944 sol-1 C15A11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15A11.3 C15A11.3 1785   I: 7389106-7389421

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C15A11.3.1 7389054 7395918 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18827   368   I: 7389054-7389421 Caenorhabditis elegans
Exon18828   169   I: 7389636-7389804 Caenorhabditis elegans
Exon18829   115   I: 7389851-7389965 Caenorhabditis elegans
Exon18830   139   I: 7390158-7390296 Caenorhabditis elegans
Exon18831   205   I: 7390454-7390658 Caenorhabditis elegans
Exon18833   58   I: 7392206-7392263 Caenorhabditis elegans
Exon18834   186   I: 7394323-7394508 Caenorhabditis elegans
Exon18835   87   I: 7394993-7395079 Caenorhabditis elegans
Exon18836   145   I: 7395133-7395277 Caenorhabditis elegans
Exon18837   120   I: 7395356-7395475 Caenorhabditis elegans
Exon18838   65   I: 7395558-7395622 Caenorhabditis elegans
Exon18839   215   I: 7395704-7395918 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C15A11.3.1 7389054 7395918 -1

1 Sequence

Length
1872

1 Sequence Ontology Term

Identifier Name Description
transcript