WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T28F4.2 Sequence Name  T28F4.2
Length (nt)  1638   Chromosome Location  I: 7480135-7480227
Chromosome . Primary Identifier  I Chromosome Location . Start  7480135
Chromosome Location . End  7480227
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F4.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06524 ASIC-2 59.5 545 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00054441
WBRNAi00004345
WBRNAi00036102

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T28F4.2 7480135 7480227 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012137 asic-2 T28F4.2 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:T28F4.2 7480135 7480227 1
CDS:T28F4.2 7480463 7480594 1
CDS:T28F4.2 7480728 7480877 1
CDS:T28F4.2 7480926 7481080 1
CDS:T28F4.2 7481198 7481327 1
CDS:T28F4.2 7481373 7481525 1
CDS:T28F4.2 7481570 7481644 1
CDS:T28F4.2 7482030 7482162 1
CDS:T28F4.2 7482211 7482383 1
CDS:T28F4.2 7482466 7482606 1
CDS:T28F4.2 7482670 7482744 1
CDS:T28F4.2 7482792 7482893 1
CDS:T28F4.2 7483267 7483392 1

1 Sequence

Length
1638

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T28F4.2.1 T28F4.2.1 1778   I: 7480108-7483505