WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26C6.1b.3 Sequence Name  C26C6.1b.3
Length (nt)  2603   Chromosome Location  I: 7499157-7503572
Chromosome . Primary Identifier  I Chromosome Location . Start  7499157
Chromosome Location . End  7503572 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26C6.1b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007042 pbrm-1 C26C6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26C6.1b C26C6.1b 1542   I: 7501380-7501727

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26C6.1b.3 7499157 7503572 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19309   263   I: 7499157-7499419 Caenorhabditis elegans
Exon19312   176   I: 7499612-7499787 Caenorhabditis elegans
Exon19315   220   I: 7499837-7500056 Caenorhabditis elegans
Exon19321   411   I: 7501317-7501727 Caenorhabditis elegans
Exon19326   226   I: 7501825-7502050 Caenorhabditis elegans
Exon19330   437   I: 7502122-7502558 Caenorhabditis elegans
Exon19334   287   I: 7502605-7502891 Caenorhabditis elegans
Exon19338   124   I: 7502944-7503067 Caenorhabditis elegans
Exon19340   459   I: 7503114-7503572 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26C6.1b.3 7499157 7503572 1

1 Sequence

Length
2603

1 Sequence Ontology Term

Identifier Name Description
transcript