WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26C6.5a.1 Sequence Name  C26C6.5a.1
Length (nt)  3697   Chromosome Location  I: 7536108-7542157
Chromosome . Primary Identifier  I Chromosome Location . Start  7536108
Chromosome Location . End  7542157 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26C6.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000938 dcp-66 C26C6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26C6.5a C26C6.5a 2166   I: 7537493-7537608

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26C6.5a.1 7536108 7542157 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19415   1501   I: 7536108-7537608 Caenorhabditis elegans
Exon19416   217   I: 7537772-7537988 Caenorhabditis elegans
Exon19418   135   I: 7538033-7538167 Caenorhabditis elegans
Exon19420   122   I: 7538464-7538585 Caenorhabditis elegans
Exon19422   76   I: 7539175-7539250 Caenorhabditis elegans
Exon19424   199   I: 7539303-7539501 Caenorhabditis elegans
Exon19426   623   I: 7540035-7540657 Caenorhabditis elegans
Exon19428   669   I: 7540979-7541647 Caenorhabditis elegans
Exon19430   155   I: 7542003-7542157 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26C6.5a.1 7536108 7542157 -1

1 Sequence

Length
3697

1 Sequence Ontology Term

Identifier Name Description
transcript