WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2030.3.1 Sequence Name  D2030.3.1
Length (nt)  1601   Chromosome Location  I: 7578547-7580833
Chromosome . Primary Identifier  I Chromosome Location . Start  7578547
Chromosome Location . End  7580833 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2030.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008413 D2030.3 D2030.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2030.3 D2030.3 1527   I: 7578619-7578972

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2030.3.1 7578547 7580833 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19496   426   I: 7578547-7578972 Caenorhabditis elegans
Exon19497   189   I: 7579021-7579209 Caenorhabditis elegans
Exon19498   270   I: 7579258-7579527 Caenorhabditis elegans
Exon19499   236   I: 7579971-7580206 Caenorhabditis elegans
Exon19500   415   I: 7580274-7580688 Caenorhabditis elegans
Exon19501   65   I: 7580769-7580833 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2030.3.1 7578547 7580833 -1

1 Sequence

Length
1601

1 Sequence Ontology Term

Identifier Name Description
transcript