WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D2030.5 Sequence Name  D2030.5
Length (nt)  489   Chromosome Location  I: 7582121-7582183
Chromosome . Primary Identifier  I Chromosome Location . Start  7582121
Chromosome Location . End  7582183
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2030.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE09082 MCE-1 17.5 162 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00043475
WBRNAi00003286
WBRNAi00030402
WBRNAi00116911

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D2030.5 7582121 7582183 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008415 mce-1 D2030.5 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:D2030.5 7582121 7582183 1
CDS:D2030.5 7582258 7582383 1
CDS:D2030.5 7582727 7583026 1

1 Sequence

Length
489

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D2030.5.1 D2030.5.1 811   I: 7582106-7583333