WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2030.8.1 Sequence Name  D2030.8.1
Length (nt)  2217   Chromosome Location  I: 7591288-7595372
Chromosome . Primary Identifier  I Chromosome Location . Start  7591288
Chromosome Location . End  7595372 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2030.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008418 D2030.8 D2030.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2030.8 D2030.8 1536   I: 7591299-7591384

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2030.8.1 7591288 7595372 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19542   97   I: 7591288-7591384 Caenorhabditis elegans
Exon19544   107   I: 7591432-7591538 Caenorhabditis elegans
Exon19546   110   I: 7591752-7591861 Caenorhabditis elegans
Exon19548   339   I: 7591909-7592247 Caenorhabditis elegans
Exon19550   203   I: 7592872-7593074 Caenorhabditis elegans
Exon19552   132   I: 7593134-7593265 Caenorhabditis elegans
Exon19554   79   I: 7593311-7593389 Caenorhabditis elegans
Exon19556   237   I: 7593684-7593920 Caenorhabditis elegans
Exon19558   162   I: 7594414-7594575 Caenorhabditis elegans
Exon19560   751   I: 7594622-7595372 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2030.8.1 7591288 7595372 1

1 Sequence

Length
2217

1 Sequence Ontology Term

Identifier Name Description
transcript