WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29D11.1.1 Sequence Name  F29D11.1.1
Length (nt)  14711   Chromosome Location  I: 7614176-7634143
Chromosome . Primary Identifier  I Chromosome Location . Start  7614176
Chromosome Location . End  7634143 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29D11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003071 lrp-1 F29D11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29D11.1 F29D11.1 14262   I: 7614271-7614361

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29D11.1.1 7614176 7634143 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19657   186   I: 7614176-7614361 Caenorhabditis elegans
Exon19658   171   I: 7616029-7616199 Caenorhabditis elegans
Exon19659   132   I: 7616336-7616467 Caenorhabditis elegans
Exon19660   122   I: 7616536-7616657 Caenorhabditis elegans
Exon19661   139   I: 7616713-7616851 Caenorhabditis elegans
Exon19662   237   I: 7616901-7617137 Caenorhabditis elegans
Exon19663   496   I: 7617486-7617981 Caenorhabditis elegans
Exon19664   189   I: 7618114-7618302 Caenorhabditis elegans
Exon19665   178   I: 7618347-7618524 Caenorhabditis elegans
Exon19666   584   I: 7618748-7619331 Caenorhabditis elegans
Exon19667   282   I: 7619622-7619903 Caenorhabditis elegans
Exon19668   304   I: 7619955-7620258 Caenorhabditis elegans
Exon19669   545   I: 7620554-7621098 Caenorhabditis elegans
Exon19670   514   I: 7621418-7621931 Caenorhabditis elegans
Exon19671   300   I: 7621984-7622283 Caenorhabditis elegans
Exon19672   1014   I: 7622332-7623345 Caenorhabditis elegans
Exon19673   131   I: 7623494-7623624 Caenorhabditis elegans
Exon19674   574   I: 7623693-7624266 Caenorhabditis elegans
Exon19675   229   I: 7624469-7624697 Caenorhabditis elegans
Exon19676   184   I: 7624752-7624935 Caenorhabditis elegans
Exon19677   3251   I: 7625007-7628257 Caenorhabditis elegans
Exon19678   147   I: 7628393-7628539 Caenorhabditis elegans
Exon19679   2048   I: 7628777-7630824 Caenorhabditis elegans
Exon19680   388   I: 7631044-7631431 Caenorhabditis elegans
Exon19681   1643   I: 7631490-7633132 Caenorhabditis elegans
Exon19682   250   I: 7633180-7633429 Caenorhabditis elegans
Exon19683   473   I: 7633671-7634143 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29D11.1.1 7614176 7634143 1

1 Sequence

Length
14711

1 Sequence Ontology Term

Identifier Name Description
transcript