WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29D11.2.1 Sequence Name  F29D11.2.1
Length (nt)  3830   Chromosome Location  I: 7634492-7639785
Chromosome . Primary Identifier  I Chromosome Location . Start  7634492
Chromosome Location . End  7639785 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29D11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009254 capg-1 F29D11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29D11.2 F29D11.2 3462   I: 7634838-7634935

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29D11.2.1 7634492 7639785 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19684   444   I: 7634492-7634935 Caenorhabditis elegans
Exon19685   361   I: 7634995-7635355 Caenorhabditis elegans
Exon19686   171   I: 7635413-7635583 Caenorhabditis elegans
Exon19687   181   I: 7636121-7636301 Caenorhabditis elegans
Exon19688   596   I: 7636362-7636957 Caenorhabditis elegans
Exon19689   427   I: 7637008-7637434 Caenorhabditis elegans
Exon19690   150   I: 7637490-7637639 Caenorhabditis elegans
Exon19691   421   I: 7637692-7638112 Caenorhabditis elegans
Exon19692   225   I: 7638160-7638384 Caenorhabditis elegans
Exon19693   103   I: 7638728-7638830 Caenorhabditis elegans
Exon19694   171   I: 7638889-7639059 Caenorhabditis elegans
Exon19695   207   I: 7639108-7639314 Caenorhabditis elegans
Exon19696   103   I: 7639372-7639474 Caenorhabditis elegans
Exon19698   270   I: 7639516-7639785 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29D11.2.1 7634492 7639785 -1

1 Sequence

Length
3830

1 Sequence Ontology Term

Identifier Name Description
transcript