WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26A3.2a.1 Sequence Name  F26A3.2a.1
Length (nt)  582   Chromosome Location  I: 7642457-7643328
Chromosome . Primary Identifier  I Chromosome Location . Start  7642457
Chromosome Location . End  7643328 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26A3.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009141 ncbp-2 F26A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26A3.2a F26A3.2a 477   I: 7642475-7642491

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26A3.2a.1 7642457 7643328 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19706   35   I: 7642457-7642491 Caenorhabditis elegans
Exon19710   209   I: 7642595-7642803 Caenorhabditis elegans
Exon19714   182   I: 7642898-7643079 Caenorhabditis elegans
Exon19716   156   I: 7643173-7643328 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26A3.2a.1 7642457 7643328 -1

1 Sequence

Length
582

1 Sequence Ontology Term

Identifier Name Description
transcript