WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26A3.8a.1 Sequence Name  F26A3.8a.1
Length (nt)  5024   Chromosome Location  I: 7643432-7649777
Chromosome . Primary Identifier  I Chromosome Location . Start  7643432
Chromosome Location . End  7649777 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26A3.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004508 rrf-1 F26A3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26A3.8a F26A3.8a 4806   I: 7643640-7643800

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26A3.8a.1 7643432 7649777 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19719   369   I: 7643432-7643800 Caenorhabditis elegans
Exon19721   120   I: 7643848-7643967 Caenorhabditis elegans
Exon19725   250   I: 7644018-7644267 Caenorhabditis elegans
Exon19727   527   I: 7644572-7645098 Caenorhabditis elegans
Exon19729   136   I: 7645151-7645286 Caenorhabditis elegans
Exon19731   180   I: 7645339-7645518 Caenorhabditis elegans
Exon19733   272   I: 7645564-7645835 Caenorhabditis elegans
Exon19735   202   I: 7645881-7646082 Caenorhabditis elegans
Exon19737   458   I: 7646138-7646595 Caenorhabditis elegans
Exon19739   112   I: 7646643-7646754 Caenorhabditis elegans
Exon19741   363   I: 7646805-7647167 Caenorhabditis elegans
Exon19743   180   I: 7647212-7647391 Caenorhabditis elegans
Exon19745   543   I: 7647469-7648011 Caenorhabditis elegans
Exon19747   267   I: 7648060-7648326 Caenorhabditis elegans
Exon19749   180   I: 7648388-7648567 Caenorhabditis elegans
Exon19751   144   I: 7648646-7648789 Caenorhabditis elegans
Exon19753   123   I: 7648838-7648960 Caenorhabditis elegans
Exon19755   321   I: 7649036-7649356 Caenorhabditis elegans
Exon19758   159   I: 7649407-7649565 Caenorhabditis elegans
Exon19759   118   I: 7649660-7649777 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26A3.8a.1 7643432 7649777 -1

1 Sequence

Length
5024

1 Sequence Ontology Term

Identifier Name Description
transcript