WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26A3.3.1 Sequence Name  F26A3.3.1
Length (nt)  5291   Chromosome Location  I: 7650341-7656338
Chromosome . Primary Identifier  I Chromosome Location . Start  7650341
Chromosome Location . End  7656338 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26A3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001214 ego-1 F26A3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26A3.3 F26A3.3 4899   I: 7650667-7650833

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26A3.3.1 7650341 7656338 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19760   493   I: 7650341-7650833 Caenorhabditis elegans
Exon19761   370   I: 7650886-7651255 Caenorhabditis elegans
Exon19762   530   I: 7651305-7651834 Caenorhabditis elegans
Exon19763   139   I: 7651882-7652020 Caenorhabditis elegans
Exon19764   180   I: 7652069-7652248 Caenorhabditis elegans
Exon19765   474   I: 7652294-7652767 Caenorhabditis elegans
Exon19766   443   I: 7652835-7653277 Caenorhabditis elegans
Exon19767   112   I: 7653326-7653437 Caenorhabditis elegans
Exon19768   378   I: 7653486-7653863 Caenorhabditis elegans
Exon19769   1182   I: 7653908-7655089 Caenorhabditis elegans
Exon19770   135   I: 7655135-7655269 Caenorhabditis elegans
Exon19771   141   I: 7655348-7655488 Caenorhabditis elegans
Exon19772   375   I: 7655538-7655912 Caenorhabditis elegans
Exon19773   165   I: 7655957-7656121 Caenorhabditis elegans
Exon19774   174   I: 7656165-7656338 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26A3.3.1 7650341 7656338 -1

1 Sequence

Length
5291

1 Sequence Ontology Term

Identifier Name Description
transcript