WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27D4.6b.1 Sequence Name  F27D4.6b.1
Length (nt)  3699   Chromosome Location  I: 7731190-7737995
Chromosome . Primary Identifier  I Chromosome Location . Start  7731190
Chromosome Location . End  7737995 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27D4.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009190 F27D4.6 F27D4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27D4.6b F27D4.6b 3627   I: 7731190-7731227

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27D4.6b.1 7731190 7737995 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19968   38   I: 7731190-7731227 Caenorhabditis elegans
Exon19973   107   I: 7732073-7732179 Caenorhabditis elegans
Exon19977   159   I: 7732226-7732384 Caenorhabditis elegans
Exon19981   170   I: 7732431-7732600 Caenorhabditis elegans
Exon19985   187   I: 7732860-7733046 Caenorhabditis elegans
Exon19989   54   I: 7733121-7733174 Caenorhabditis elegans
Exon19993   197   I: 7733290-7733486 Caenorhabditis elegans
Exon19997   232   I: 7733705-7733936 Caenorhabditis elegans
Exon20001   83   I: 7733986-7734068 Caenorhabditis elegans
Exon20005   111   I: 7734121-7734231 Caenorhabditis elegans
Exon20009   332   I: 7734282-7734613 Caenorhabditis elegans
Exon20013   47   I: 7734660-7734706 Caenorhabditis elegans
Exon20017   80   I: 7734755-7734834 Caenorhabditis elegans
Exon20021   111   I: 7734880-7734990 Caenorhabditis elegans
Exon20025   139   I: 7735035-7735173 Caenorhabditis elegans
Exon20029   57   I: 7735221-7735277 Caenorhabditis elegans
Exon20033   80   I: 7735487-7735566 Caenorhabditis elegans
Exon20037   108   I: 7735611-7735718 Caenorhabditis elegans
Exon20041   73   I: 7735763-7735835 Caenorhabditis elegans
Exon20045   27   I: 7735884-7735910 Caenorhabditis elegans
Exon20049   60   I: 7735960-7736019 Caenorhabditis elegans
Exon20053   33   I: 7736255-7736287 Caenorhabditis elegans
Exon20057   233   I: 7736336-7736568 Caenorhabditis elegans
Exon20061   127   I: 7736616-7736742 Caenorhabditis elegans
Exon20065   245   I: 7736799-7737043 Caenorhabditis elegans
Exon20070   90   I: 7737118-7737207 Caenorhabditis elegans
Exon20075   148   I: 7737255-7737402 Caenorhabditis elegans
Exon20079   110   I: 7737488-7737597 Caenorhabditis elegans
Exon20083   87   I: 7737645-7737731 Caenorhabditis elegans
Exon20087   86   I: 7737775-7737860 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27D4.6b.1 7731190 7737995 1

1 Sequence

Length
3699

1 Sequence Ontology Term

Identifier Name Description
transcript