WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H15N14.2a.1 Sequence Name  H15N14.2a.1
Length (nt)  2804   Chromosome Location  I: 7766532-7772231
Chromosome . Primary Identifier  I Chromosome Location . Start  7766532
Chromosome Location . End  7772231 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H15N14.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003818 nsf-1 H15N14.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H15N14.2a H15N14.2a 2475   I: 7766838-7766964

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H15N14.2a.1 7766532 7772231 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20096   433   I: 7766532-7766964 Caenorhabditis elegans
Exon20098   209   I: 7767532-7767740 Caenorhabditis elegans
Exon20100   80   I: 7767786-7767865 Caenorhabditis elegans
Exon20102   201   I: 7767912-7768112 Caenorhabditis elegans
Exon20104   157   I: 7768165-7768321 Caenorhabditis elegans
Exon20106   450   I: 7768368-7768817 Caenorhabditis elegans
Exon20108   418   I: 7768879-7769296 Caenorhabditis elegans
Exon20110   249   I: 7769347-7769595 Caenorhabditis elegans
Exon20112   78   I: 7769642-7769719 Caenorhabditis elegans
Exon20114   216   I: 7769766-7769981 Caenorhabditis elegans
Exon20117   175   I: 7770065-7770239 Caenorhabditis elegans
Exon20118   64   I: 7771982-7772045 Caenorhabditis elegans
Exon20119   74   I: 7772158-7772231 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H15N14.2a.1 7766532 7772231 -1

1 Sequence

Length
2804

1 Sequence Ontology Term

Identifier Name Description
transcript