WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H15N14.2b.1 Sequence Name  H15N14.2b.1
Length (nt)  2277   Chromosome Location  I: 7766838-7770156
Chromosome . Primary Identifier  I Chromosome Location . Start  7766838
Chromosome Location . End  7770156 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H15N14.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003818 nsf-1 H15N14.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H15N14.2b H15N14.2b 2277   I: 7766838-7766964

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H15N14.2b.1 7766838 7770156 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20097   127   I: 7766838-7766964 Caenorhabditis elegans
Exon20099   209   I: 7767532-7767740 Caenorhabditis elegans
Exon20101   80   I: 7767786-7767865 Caenorhabditis elegans
Exon20103   201   I: 7767912-7768112 Caenorhabditis elegans
Exon20105   157   I: 7768165-7768321 Caenorhabditis elegans
Exon20107   450   I: 7768368-7768817 Caenorhabditis elegans
Exon20109   418   I: 7768879-7769296 Caenorhabditis elegans
Exon20111   249   I: 7769347-7769595 Caenorhabditis elegans
Exon20113   78   I: 7769642-7769719 Caenorhabditis elegans
Exon20115   216   I: 7769766-7769981 Caenorhabditis elegans
Exon20116   92   I: 7770065-7770156 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H15N14.2b.1 7766838 7770156 -1

1 Sequence

Length
2277

1 Sequence Ontology Term

Identifier Name Description
transcript