WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2005.2.1 Sequence Name  D2005.2.1
Length (nt)  842   Chromosome Location  I: 7800455-7801822
Chromosome . Primary Identifier  I Chromosome Location . Start  7800455
Chromosome Location . End  7801822 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2005.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003746 nlp-8 D2005.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2005.2 D2005.2 519   I: 7800764-7800870

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2005.2.1 7800455 7801822 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20185   416   I: 7800455-7800870 Caenorhabditis elegans
Exon20186   296   I: 7800946-7801241 Caenorhabditis elegans
Exon20187   65   I: 7801583-7801647 Caenorhabditis elegans
Exon20188   65   I: 7801758-7801822 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2005.2.1 7800455 7801822 -1

1 Sequence

Length
842

1 Sequence Ontology Term

Identifier Name Description
transcript