WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2005.3.1 Sequence Name  D2005.3.1
Length (nt)  505   Chromosome Location  I: 7813762-7815042
Chromosome . Primary Identifier  I Chromosome Location . Start  7813762
Chromosome Location . End  7815042 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2005.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008398 D2005.3 D2005.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2005.3 D2005.3 393   I: 7813831-7813975

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2005.3.1 7813762 7815042 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20189   214   I: 7813762-7813975 Caenorhabditis elegans
Exon20190   98   I: 7814238-7814335 Caenorhabditis elegans
Exon20191   69   I: 7814387-7814455 Caenorhabditis elegans
Exon20192   63   I: 7814543-7814605 Caenorhabditis elegans
Exon20194   61   I: 7814982-7815042 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2005.3.1 7813762 7815042 -1

1 Sequence

Length
505

1 Sequence Ontology Term

Identifier Name Description
transcript