WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2005.5.1 Sequence Name  D2005.5.1
Length (nt)  3510   Chromosome Location  I: 7820831-7826378
Chromosome . Primary Identifier  I Chromosome Location . Start  7820831
Chromosome Location . End  7826378 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2005.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008400 drh-3 D2005.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2005.5 D2005.5 3360   I: 7820843-7820940

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2005.5.1 7820831 7826378 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20245   110   I: 7820831-7820940 Caenorhabditis elegans
Exon20246   174   I: 7821000-7821173 Caenorhabditis elegans
Exon20247   76   I: 7821427-7821502 Caenorhabditis elegans
Exon20248   82   I: 7821550-7821631 Caenorhabditis elegans
Exon20249   525   I: 7821677-7822201 Caenorhabditis elegans
Exon20250   126   I: 7822389-7822514 Caenorhabditis elegans
Exon20251   182   I: 7822561-7822742 Caenorhabditis elegans
Exon20252   182   I: 7822824-7823005 Caenorhabditis elegans
Exon20253   326   I: 7823203-7823528 Caenorhabditis elegans
Exon20254   281   I: 7823965-7824245 Caenorhabditis elegans
Exon20255   909   I: 7824289-7825197 Caenorhabditis elegans
Exon20256   101   I: 7825637-7825737 Caenorhabditis elegans
Exon20257   139   I: 7825794-7825932 Caenorhabditis elegans
Exon20258   107   I: 7825980-7826086 Caenorhabditis elegans
Exon20259   190   I: 7826189-7826378 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2005.5.1 7820831 7826378 1

1 Sequence

Length
3510

1 Sequence Ontology Term

Identifier Name Description
transcript