WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R11A5.1a Sequence Name  R11A5.1a
Length (nt)  2838   Chromosome Location  I: 7853750-7853826
Chromosome . Primary Identifier  I Chromosome Location . Start  7853750
Chromosome Location . End  7853826
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11A5.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46845 APB-3, isoform a 106.6 945 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00082977
WBRNAi00061007
WBRNAi00051756
WBRNAi00004077
WBRNAi00076613
WBRNAi00102230
WBRNAi00034846
WBRNAi00116803
WBRNAi00062342
WBRNAi00111841
WBRNAi00023290
WBRNAi00023558
WBRNAi00023800
WBRNAi00024088
WBRNAi00114427
WBRNAi00114433
WBRNAi00090897

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R11A5.1a 7853750 7853826 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000163 apb-3 R11A5.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:R11A5.1a 7853750 7853826 1
CDS:R11A5.1a 7853941 7854019 1
CDS:R11A5.1a 7854070 7854780 1
CDS:R11A5.1a 7854863 7854985 1
CDS:R11A5.1a 7855406 7855540 1
CDS:R11A5.1a 7855590 7856583 1
CDS:R11A5.1a 7856853 7857274 1
CDS:R11A5.1a 7857450 7857746 1

1 Sequence

Length
2838

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R11A5.1a.1 R11A5.1a.1 2945   I: 7853750-7857853