WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55D12.1.1 Sequence Name  F55D12.1.1
Length (nt)  649   Chromosome Location  I: 7884319-7885765
Chromosome . Primary Identifier  I Chromosome Location . Start  7884319
Chromosome Location . End  7885765 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55D12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010110 F55D12.1 F55D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55D12.1 F55D12.1 426   I: 7884352-7884481

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55D12.1.1 7884319 7885765 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20420   163   I: 7884319-7884481 Caenorhabditis elegans
Exon20422   111   I: 7884808-7884918 Caenorhabditis elegans
Exon20424   78   I: 7885150-7885227 Caenorhabditis elegans
Exon20426   297   I: 7885469-7885765 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55D12.1.1 7884319 7885765 1

1 Sequence

Length
649

1 Sequence Ontology Term

Identifier Name Description
transcript