WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55D12.2b.1 Sequence Name  F55D12.2b.1
Length (nt)  2373   Chromosome Location  I: 7889508-7894856
Chromosome . Primary Identifier  I Chromosome Location . Start  7889508
Chromosome Location . End  7894856 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55D12.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010111 F55D12.2 F55D12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55D12.2b F55D12.2b 1767   I: 7891853-7891951

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55D12.2b.1 7889508 7894856 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20433   104   I: 7889508-7889611 Caenorhabditis elegans
Exon20436   194   I: 7891443-7891636 Caenorhabditis elegans
Exon20438   267   I: 7891685-7891951 Caenorhabditis elegans
Exon20441   79   I: 7892035-7892113 Caenorhabditis elegans
Exon20443   278   I: 7892197-7892474 Caenorhabditis elegans
Exon20445   87   I: 7892524-7892610 Caenorhabditis elegans
Exon20447   105   I: 7892682-7892786 Caenorhabditis elegans
Exon20449   121   I: 7892839-7892959 Caenorhabditis elegans
Exon20451   139   I: 7893265-7893403 Caenorhabditis elegans
Exon20453   205   I: 7893449-7893653 Caenorhabditis elegans
Exon20455   189   I: 7893790-7893978 Caenorhabditis elegans
Exon20457   170   I: 7894025-7894194 Caenorhabditis elegans
Exon20459   142   I: 7894241-7894382 Caenorhabditis elegans
Exon20460   293   I: 7894564-7894856 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55D12.2b.1 7889508 7894856 1

1 Sequence

Length
2373

1 Sequence Ontology Term

Identifier Name Description
transcript