WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55D12.4a.1 Sequence Name  F55D12.4a.1
Length (nt)  1722   Chromosome Location  I: 7898434-7903334
Chromosome . Primary Identifier  I Chromosome Location . Start  7898434
Chromosome Location . End  7903334 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55D12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006790 unc-55 F55D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55D12.4a F55D12.4a 1113   I: 7899043-7899225

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55D12.4a.1 7898434 7903334 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20465   792   I: 7898434-7899225 Caenorhabditis elegans
Exon20467   98   I: 7899607-7899704 Caenorhabditis elegans
Exon20469   82   I: 7900292-7900373 Caenorhabditis elegans
Exon20471   308   I: 7900514-7900821 Caenorhabditis elegans
Exon20474   174   I: 7900865-7901038 Caenorhabditis elegans
Exon20475   128   I: 7901790-7901917 Caenorhabditis elegans
Exon20482   140   I: 7903195-7903334 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55D12.4a.1 7898434 7903334 -1

1 Sequence

Length
1722

1 Sequence Ontology Term

Identifier Name Description
transcript