WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55D12.5b.1 Sequence Name  F55D12.5b.1
Length (nt)  1164   Chromosome Location  I: 7907163-7910133
Chromosome . Primary Identifier  I Chromosome Location . Start  7907163
Chromosome Location . End  7910133 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55D12.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010113 F55D12.5 F55D12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55D12.5b F55D12.5b 1164   I: 7907163-7907369

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55D12.5b.1 7907163 7910133 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20485   207   I: 7907163-7907369 Caenorhabditis elegans
Exon20487   291   I: 7907707-7907997 Caenorhabditis elegans
Exon20489   622   I: 7908671-7909292 Caenorhabditis elegans
Exon20490   44   I: 7910090-7910133 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55D12.5b.1 7907163 7910133 -1

1 Sequence

Length
1164

1 Sequence Ontology Term

Identifier Name Description
transcript