WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22C1.4.1 Sequence Name  T22C1.4.1
Length (nt)  425   Chromosome Location  I: 7940134-7940728
Chromosome . Primary Identifier  I Chromosome Location . Start  7940134
Chromosome Location . End  7940728 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22C1.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011915 ctf-8 T22C1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22C1.4 T22C1.4 336   I: 7940192-7940347

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22C1.4.1 7940134 7940728 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20556   214   I: 7940134-7940347 Caenorhabditis elegans
Exon20557   68   I: 7940429-7940496 Caenorhabditis elegans
Exon20558   86   I: 7940544-7940629 Caenorhabditis elegans
Exon20559   57   I: 7940672-7940728 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22C1.4.1 7940134 7940728 -1

1 Sequence

Length
425

1 Sequence Ontology Term

Identifier Name Description
transcript