WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22C1.6.1 Sequence Name  T22C1.6.1
Length (nt)  1482   Chromosome Location  I: 7942719-7945551
Chromosome . Primary Identifier  I Chromosome Location . Start  7942719
Chromosome Location . End  7945551 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22C1.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011917 T22C1.6 T22C1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22C1.6 T22C1.6 1008   I: 7942941-7942956

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22C1.6.1 7942719 7945551 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20564   238   I: 7942719-7942956 Caenorhabditis elegans
Exon20565   122   I: 7943526-7943647 Caenorhabditis elegans
Exon20566   60   I: 7943700-7943759 Caenorhabditis elegans
Exon20567   75   I: 7943910-7943984 Caenorhabditis elegans
Exon20568   581   I: 7944026-7944606 Caenorhabditis elegans
Exon20569   406   I: 7945146-7945551 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22C1.6.1 7942719 7945551 1

1 Sequence

Length
1482

1 Sequence Ontology Term

Identifier Name Description
transcript